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Agar

Company: Merck
Catalog#: A5306
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Assay for Assessing Mucin Binding to Bacteria and Bacterial Proteins
Author:
Date:
2021-03-05
[Abstract]  

Legionella pneumophila, a Gram-negative bacterium and the causative agent of Legionnaires’ disease, exports over 300 effector proteins/virulence factors, through its type II (T2SS) and type IV secretion systems (T4SS). One such T2SS virulence factor, ChiA, not only functions as a chitinase, but also as a novel mucinase, which we believe aids ChiA-dependent virulence during lung infection. Previously published protocols manipulated wild-type L. pneumophila strain 130b and its chiA mutant to express plasmid-encoded GFP. Similarly, earlier studies demonstrated that wheat germ agglutinin (WGA) can be fluorescently labeled and can bind to mucins. In the current protocol, GFP-labeled bacteria were incubated with type II and type III porcine stomach mucins, which were then labeled with

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[摘要]  [摘要]嗜肺军团杆菌是革兰氏阴性细菌,是军团菌病的病原体,通过其II型(T2SS)和IV型分泌系统(T4SS)出口了300多种效应蛋白/毒力因子。一种这样的T2SS毒力因子ChiA不仅起几丁质酶的作用,而且还起新型粘蛋白酶的作用,我们认为它可以在肺部感染期间帮助ChiA依赖性毒力。以前发表的协议操纵野生型肺炎嗜血杆菌130b菌株及其chiA突变体,以表达质粒编码的GFP。同样,较早的研究表明,小麦胚芽凝集素(WGA)可以进行荧光标记,并可以与粘蛋白结合。 在当前方案中,将GFP标记的细菌与II型和III型猪胃粘蛋白孵育,然后用TexasRed标记的WGA进行标记,并通过流式细胞术进行分析,以测量在有或没有HLA的情况下细菌与粘蛋白的结合。内源性ChiA。另外,我们分析了纯化的ChiA与II型和III型猪胃粘蛋白的结合。该方案将细菌和直接蛋白结合到粘蛋白上,并且是第一个使用WGA和流式细胞术分析革兰氏阴性细菌与粘蛋白结合的方法。



图形摘要:

自动生成手机说明的屏幕截图

评估细菌和蛋白质与粘蛋白结合的策略


[背景技术]嗜肺军团菌(LPN ),革兰氏阴性细菌,是军团病,肺炎的严重形式的病原体。L ...

Molecular and Phenotypic Characterization Following RNAi Mediated Knockdown in Drosophila
Author:
Date:
2021-02-20
[Abstract]  

Loss of function studies shed significant light on the involvement of a gene or gene product in different cellular processes. Short hairpin RNA (shRNA) mediated RNA interference (RNAi) is a classical yet straightforward technique frequently used to knock down a gene for assessing its function. Similar perturbations in gene expression can be achieved by siRNA, microRNA, or CRISPR-Cas9 methods also. In Drosophila genetics, the UAS-GAL4 system is utilized to express RNAi and make ubiquitous and tissue-specific knockdowns possible. The UAS-GAL4 system borrows genetic components of S. cerevisiae, hence rule out the possibility of accidental expression of the system. In particular, this technique uses a target-specific shRNA, and the expression of the same is governed by the upstream activating

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[摘要]  [摘要]功能丧失的研究为基因或基因产物在不同细胞过程中的参与提供了重要启示。短发夹RNA(shRNA)介导的RNA干扰(RNAi)是一种经典而直接的技术,经常用于敲低基因以评估其功能。也可以通过siRNA,microRNA或CRISPR-Cas9方法实现类似的基因表达扰动。在果蝇遗传学中,UAS-GAL4系统用于表达RNAi,并使遍在和组织特异性的基因敲除成为可能。UAS-GAL4系统借鉴了酿酒酵母的遗传成分,因此排除了系统意外表达的可能性。特别地,该技术使用靶标特异性shRNA,并且其表达受上游激活序列(UAS)支配。由特定启动子调节的GAL4受控表达可以普遍或以组织特异性方式驱动干扰RNA的表达。通过RNA分离和半定量RT-PCR反应,然后进行琼脂糖凝胶电泳来测量敲低效率。我们还采用了免疫染色程序来评估击倒效率。

RNAi为研究人员提供了降低基因产物水平(相当于亚同型条件)并研究结果的选择。基于UAS-GAL4的RNAi方法提供了基因表达的时空调节,还有助于推断早期发育阶段所需的基因功能。


[背景]果蝇果蝇(果蝇)是在研究实验室经常使用的一种通用模式生物。果蝇易于处理,繁殖和维护。而且,精心制作却寿命短,繁殖力高的果蝇具有更多的优势。果蝇遗传学工具的易用性有助于发展对基因功能的全面了解。由于果蝇基因中有60%与人类基因同源,并且具有前面提到的其他优点,因此果蝇是研究体内基因功能的显而易见的模型生物。 ...

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