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Company: Thermo Fischer Scientific
Catalog#: S271-3
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FRET-based Microscopy Assay to Measure Activity of Membrane Amino Acid Transporters with Single-transporter Resolution
Author:
Date:
2021-04-05
[Abstract]  

Secondary active transporters reside in cell membranes transporting polar solutes like amino acids against steep concentration gradients, using electrochemical gradients of ions as energy sources. Commonly, ensemble-based measurements of radiolabeled substrate uptakes or transport currents inform on kinetic parameters of transporters. Here we describe a fluorescence-based functional assay for glutamate and aspartate transporters that provides single-transporter, single-transport cycle resolution using an archaeal elevator-type sodium and aspartate symporter GltPh as a model system. We prepare proteo-liposomes containing reconstituted purified GltPh transporters and an encapsulated periplasmic glutamate/aspartate-binding protein, PEB1a, labeled with donor and acceptor fluorophores. We then

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[摘要]  [摘要]次级活性转运蛋白驻留在细胞膜中,利用离子的电化学梯度作为能量源,可针对陡峭的浓度梯度转运极性氨基酸(如氨基酸)。通常,基于集合的放射性标记底物摄取或转运电流的测量可确定转运蛋白的动力学参数。在这里,我们描述了一种基于荧光的谷氨酸和天冬氨酸转运蛋白功能测定方法,该方法使用古细菌升降剂型钠和天冬氨酸共转运蛋白Glt Ph作为模型系统,提供了单转运蛋白,单转运周期的分辨率。我们准备包含重组的纯化的Glt Ph转运蛋白和封装的周质谷氨酸/天冬氨酸结合蛋白,PEB1a,用供体和受体荧光团标记的蛋白脂质体。然后,我们将蛋白脂质体表面固定化,并使用单分子全内反射荧光(TIRF)显微镜测量随时间变化的运输依赖性荧光共振能量转移(FRET)效率变化。与放射性配体摄取测定法相比,该测定法在时间分辨率上提高了10-100倍。它还可以对不同转运周期步骤进行动力学表征,并识别转运蛋白种群内的动力学异质性。


[背景]膜驻留的二级主动转运蛋白或溶质载体(SLC)介导氨基酸,激素,神经递质,维生素和药物等溶质的细胞摄取。他们将集中的底物摄取与主要通过Na + / K + ATPases的作用维持的离子电化学梯度的能量上有利的耗散结合在一起(Lingrel and Kuntzweiler ...

Analysis of Pseudomonas aeruginosa c-di-GMP High and Low Subpopulations Using Flow-assisted Cell Sorting (FACS) and Quantitative Reverse Transcriptase PCR (qRT-PCR)
Author:
Date:
2021-01-20
[Abstract]  

Cyclic diguanylate monophosphate (c-di-GMP) is a second messenger signaling molecule that drives the transition from planktonic to the biofilm mode of growth in many bacterial species. Pseudomonas aeruginosa has at least two surface sensing systems that produce c-di-GMP in response to surface attachment, the Wsp and Pil-Chp systems. We recently used a plasmid-based c-di-GMP reporter (pPcdrA::gfp) to describe how the Wsp system generates heterogeneity in surface sensing, resulting in two physiologically distinct subpopulations of cells during early biofilm formation. One subpopulation has elevated c-di-GMP and produces biofilm matrix, serving as the founders of initial microcolonies. The other subpopulation has low c-di-GMP and engages in surface motility, allowing for exploration of the

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[摘要]  [摘要]环状双鸟苷酸单磷酸酯(c-di-GMP)是第二个信使信号分子,它驱动许多细菌物种从浮游生物向生物膜生长的转变。铜绿假单胞菌具有至少两个响应于表面附着而产生c-di-GMP的表面传感系统,即Wsp和Pil-Chp系统。我们最近使用了基于质粒的c-di-GMP报告基因(pP cdrA :: gfp )描述Wsp系统如何在表面感应中产生异质性,从而在早期生物膜形成过程中导致两个生理上不同的细胞亚群。一个亚群的c-di-GMP升高并产生生物膜基质,从而成为最初的微殖民地的奠基人。另一个亚群的c-di-GMP较低,并且具有表面运动性,可以探索表面。在这里,我们描述了一项关键实验的协议,以确认我们在表面传感过程中对c-di-GMP异质性的初步观察:使用流辅助细胞分选(FACS)来分离具有高和低c- di- G的细胞亚群GMP报告基因活性,然后是已知响应于细胞c-di-GMP水平(pelA和pslA )被转录调控的基因的定量逆转录酶PCR(qRT-PCR )。该方案可以被其他人修改以分离高c-di-GMP铜绿假单胞菌细胞的亚群,这些亚群在基因上是相同的,但在表型上是不同的,以便将来像我们一样检查特定的mRNA转录本,或者大概用于其他应用如RNAseq,蛋白质组学或TNseq。

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[背景]第二信使信号分子环状单鸟苷酸单磷酸酯(c-di-GMP)可使细菌响应环境条件而迅速修饰其细胞表面。双鸟苷酸环化酶(DGC)是含有从两个GTP分子合成c-di-GMP的GGDEF氨基酸序列基序的蛋白质,磷酸二酯酶(PDE)是具有EAL或HD-GYP基序的蛋白,可将c-di-GMP水解为线性pGpG或GMP ...

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