| Expression and Purification of the Human Cation-chloride Cotransporter KCC1 from HEK293F Cells for Structural Studies
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Author:
Date:
2021-04-05
[Abstract] Cation-chloride cotransporters (CCCs) mediate the coupled, electroneutral symport of cations such as Na+ and/or K+ with chloride across membrane. Among CCCs family, K-Cl cotransporters (KCC1-KCC4) extrude intracellular Cl- by the transmembrane K+ gradient. In humans, these KCCs play vital roles in the physiology of the nervous system and kidney. However, mechanisms underlying the KCCs specific properties remain poorly understood, partly because purification of membrane proteins is challenging. Here, we present the protocol for purifying the full-length KCC1 from HEK293F cells used in our recent publication (Liu et al., 2019). The procedure may be adapted for functional and structural studies.
[摘要] [摘要]阳离子-氯化物共转运蛋白(CCC)介导诸如Na +和/或K +的阳离子与氯离子在膜上的耦合,电中性共价。间幼儿中心家庭,K-CL协同转运蛋白(KCC1-KCC4)抽UDE细胞内氯-通过跨膜ķ +梯度。在人类中,这些KCC在神经系统和肾脏的生理中起着至关重要的作用。然而,特定的KCC性质保持基本机制知之甚少,部分是因为膜蛋白的纯化是具有挑战性的。在这里,我们介绍了从我们最近的出版物中使用的HEK293F细胞中纯化全长KCC1的方案(Liu等人,2019)。该程序可适用于功能和结构研究。
[背景]人类溶质载体12(SLC12 )基因家族编码阳离子的氯化物协同转运蛋白(CCCS)介导Cl组成的电中性同向转运-和阳离子的Na +或(和)K +跨越质膜。根据其转运特性和氨基酸序列定义,CCC可分为几个分支,包括两个Na-K-2Cl协同转运蛋白(NKCC1和NKCC2),一个Na-Cl协同转运蛋白(NCC)和四个K-Cl协同转运蛋白(KCC1-KCC4 )。CCC在细胞体积调节,肾脏盐分重吸收和神经元GABA能调节中起重要作用。CCC的结构,生化和生物物理研究涉及在去污剂溶解状态下蛋白质生产和稳定方面的挑战。杆状病毒转导HEK293F细胞(BacMam)系统是异源表达由Eric ...
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| Live Cell FRET Analysis of the Conformational Changes of Human P-glycoprotein
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Author:
Date:
2021-02-20
[Abstract] The molecular mechanisms of P-glycoprotein (P-gp; also known as MDR1 or ABCB1) have been mainly investigated using artificial membranes such as lipid-detergent mixed micelles, artificial lipid bilayers, and membrane vesicles derived from cultured cells. Although these in vitro experiments help illustrate details about the molecular mechanisms of P-gp, they do not reflect physiological membrane environments in terms of lateral pressure, curvature, constituent lipid species, etc. The protocol presented here includes a detailed guide for analyzing the conformational change of human P-gp in living HEK293 cells by using intramolecular fluorescence resonance energy transfer (FRET), in which excitation of the donor fluorophore is transferred to the acceptor without emission of a photon when two ...
[摘要] [摘要] P-糖蛋白(P-gp;也称为MDR1或ABCB1)的分子机制已主要使用人造膜进行研究,例如脂质去污剂混合胶束,人造脂质双层和源自培养细胞的膜囊泡。尽管这些体外实验有助于阐明有关P-gp分子机制的细节,但它们在侧向压力,曲率,脂质成分等方面并未反映出生理膜环境。 此处提供的协议包括一个详细的指南,该指南用于通过使用分子内荧光共振能量转移(FRET)分析活HEK293细胞中人P-gp的构象变化,其中供体荧光团的激发被转移到受体上而不发射光子当两个荧光蛋白非常接近时。将FRET分析与膜通透性相结合,可以在活细胞中评估小分子(如核苷酸)对构象变化的贡献。
[背景] P-糖蛋白(P-gp)的是ATP驱动药转运该压出各种疏水有毒化合物到细胞外空间。P-gp由形成底物转运途径的两个跨膜结构域(TMD)和结合并水解ATP的两个核苷酸结合结构域(NBD)组成。传输至少需要两个P-gp状态。在向内(药物转运前)构型中,两个NBD分开,两个TMD向细胞内侧开放;在向外(药物转运)构象中,NBD是二聚体的,而TMD在细胞外侧略微开放(Kodan et al。,2020 )。自从发现P-gp (Juliano和Ling,1976; Chen等,1986; Ueda等,1986 ...
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| A Quantitative Assay to Measure Stress Granule Association of Proteins and Peptides in Semi-permeabilized Human Cells
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Author:
Date:
2020-12-20
[Abstract] Stress granules (SGs) are membrane-less organelles that form in the cytoplasm through phase separation, in response to diverse stressors. SGs contain translationally stalled mRNAs, proteins involved in translation, and various RNA-binding proteins (RBPs). Due to the high local concentration of aggregation-prone RBPs, SGs might act as condensation sites for aberrant phase transitions of RBPs and could favor formation of solid protein aggregates underlying the pathological cytoplasmic inclusions found in numerous neurodegenerative diseases. Most assays aiming at studying the recruitment of RBPs into SGs are based on overexpression and SG recruitment of RBPs in intact cells. These approaches are, however, often limited by the predominantly nuclear localization of many RBPs, which precludes ...
[摘要] [摘要]圣RESS颗粒剂(SGS)是膜较少细胞器形式在通过相分离细胞质中,响应于不同的压力源。SG包含翻译停滞的mRNA,翻译中涉及的蛋白和各种RNA结合蛋白(RBP)。由于易于凝集的RBP的局部浓度很高,SG可能充当RBP异常相变的缩合位点,并且可能有助于形成在许多神经退行性疾病中发现的病理性细胞质内含物的固体蛋白质聚集体。大多数分析瞄准荷兰国际集团在研究限制性商业惯例的招募SG的基础上表达和SG招聘完整细胞的限制性商业惯例。但是,这些方法通常受到许多RBP的主要核定位的限制,这排除了足以进行SG定位的细胞质RBP浓度,并且没有解决独立于SG形成的RBP募集问题。在这里,我们提出了一个定量的方法来评估重组限制性商业惯例的募集至预先形成的SG,独立于RBP的核定位,用半透细胞和荧光显微镜。在该测定中,SG被第一LY由应激诱导的,然后第质膜ë应激的细胞随后被选择性地透化,以提供重组蛋白的访问的SG。通过用小麦胚芽凝集素阻塞核孔来阻止目的蛋白的核输入。这种测定方法使人们能够定量研究在没有核导入且在受控条件下将RBP募集到SG中的分子机制。该方法允许对野生型,突变体或直接比较翻译后修饰的限制性商业惯例,用于解决第其它蛋白质电子影响“预防或促进限制性商业惯例的SG关联,并且也适用于合成的肽。
图形摘要:
工作流概述在半SG招募重组蛋白质或肽的分析透化细胞 ...
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