{{'Search' | translate}}
 

Sodium bicarbonate

碳酸氢钠

Company: Sigma-Aldrich
Catalog#: S5761
Bio-protocol()
Company-protocol()
Other protocol()

Cell-free Reconstitution of the Packaging of Cargo Proteins into Vesicles at the trans Golgi Network
Author:
Date:
2020-03-05
[Abstract]  Protein sorting at the trans Golgi network (TGN) plays important roles in targeting newly synthesized proteins to their specific destinations. The aim of this proposal is to reconstitute the packaging of non-Golgi resident cargo proteins into vesicles at the TGN, utilizing rat liver cytosol, semi-intact mammalian cells and nucleotides. The protocol describes how to perform the vesicle formation assay, how to isolate vesicles and how to detect cargo proteins in vesicles. This reconstitution assay can be used to quantitatively measure the efficiency of the packaging of a specific cargo protein into transport vesicles at the TGN under specific experimental conditions. [摘要]  [摘要] 反式高尔基体网络(TGN)上的蛋白质分选在将新合成的蛋白质靶向其特定目的地方面起着重要作用。该提议的目的是利用大鼠肝细胞溶质,半完整的哺乳动物细胞和核苷酸,在TGN处将非高尔基驻留的货物蛋白重新包装成囊泡。该协议描述了如何进行囊泡形成测定,如何分离囊泡以及如何检测囊泡中的货物蛋白。该重构测定法可用于定量测量在特定实验条件下将特定货物蛋白包装到TGN的运输小泡中的效率。

[背景] 的反式高尔基体网络(TGN)是在分泌运送路径的必要的交通枢纽。为了确保水泡运输的保真度,真核细胞利用各种蛋白质分选设备将特定的货物蛋白质准确地包装到TGN的运输小泡中,然后运至特定的目的地(Guo 等人,2014)。为了加深我们对TGN分选过程特异性的理解,重要的是开发一种能够忠实地重构TGN囊泡形成和货物分选过程的分析方法。该测定法可用于直接和定量地测量特定因子在调节特定货物蛋白包装到运输小泡中的作用。从内质网(ER)将货物蛋白包装到COPII囊泡中的无细胞重构已得到很好的建立(Kim 等,2005; Kim 等,2007; Merte 等,2010; Yuan 等。,2018;Niu 等,2019;)。已经开发出一种体外测定法,其在TGN处重构特定货物蛋白TGN46在运输小泡中的释放(Ponnambalam 等,1996;Wakana ...

mRNA Extraction from Gill Tissue for RNA-sequencing
Author:
Date:
2020-03-05
[Abstract]  Adaptation is thought to proceed in part through spatial and temporal changes in gene expression. Fish species such as the threespine stickleback are powerful vertebrate models to study the genetic architecture of adaptive changes in gene expression since divergent adaptation to different environments is common, they are abundant and easy to study in the wild and lab, and have well-established genetic and genomic resources. Fish gills, due to their respiratory and osmoregulatory roles, show many physiological adaptations to local water chemistry, including differences in gene expression. However, obtaining high-quality RNA using popular column-based extraction methods can be challenging from small tissue samples high in cartilage and bone such as fish gills. Here, we describe a bead-based ... [摘要]  [摘要 ] 适应被认为是部分通过基因表达的时空变化进行的。鱼种如 三脊棘背由于对不同环境的适应性差异很普遍,因此它们是研究基因表达适应性变化的遗传结构的强大脊椎动物模型,它们在野外和实验室中丰富且易于研究,并且具有完善的遗传和基因组资源。鱼g由于其呼吸和渗透调节作用,对局部水化学表现出许多生理适应性,包括基因表达的差异。但是,从流行于软骨和骨骼的小组织样本(例如鱼g)中,使用流行的基于柱的提取方法获得高质量的RNA可能具有挑战性。在这里,我们描述了不使用纯化柱的基于珠子的mRNA提取和转录组RNA-seq协议。为了使用动物或植物组织进行各种基因表达实验,可以根据样品量轻松调整实验方案。

[背景 ] 转录组测序(RNA-seq)用于量化基因的表达水平,鉴定样品组之间基因表达水平的差异并推断基因共表达。在进化遗传学研究,RNA-SEQ可以用来作为一种方法来研究自适应发散的分子基础(例如,Rougeux 等人;,2019 Verta酒店和Jones,2019) ,鉴定候选基因底层自适应的表型(例如,费雷拉等等人,2017),并推断未知基因的功能(例如,Rawat ...

Qualitative in vivo Bioluminescence Imaging
Author:
Date:
2018-09-20
[Abstract]  Bioluminescence imaging (BLI) technology is an advanced method of carrying out molecular imaging on live laboratory animals in vivo. This powerful technique is widely-used in studying a variety of biological processes, and it has been an ideal tool in exploring tumor growth and metastatic spread in real-time. This technique ensures the optimal use of laboratory animal resources, particularly the ethical principle of reduction in animal use, given its non-invasive nature, ensuring that ongoing biological processes can be studied over time in the same animal, without the need to euthanize groups of mice at specific time points. In this protocol, the luciferase imaging technique was developed to study the effect of co-inoculating pericytes (contractile, αSMA+ mesenchymal ... [摘要]  生物发光成像(BLI)技术是一种在体内实验室动物上进行分子成像的先进方法。 这种强大的技术广泛应用于研究各种生物过程,是实时探索肿瘤生长和转移扩散的理想工具。 该技术确保实验室动物资源的最佳利用,特别是减少动物使用的伦理原则,考虑到其非侵入性,确保可以在同一动物中随时间研究正在进行的生物过程,而无需安乐死 小鼠在特定的时间点。 在该方案中,开发了荧光素酶成像技术以研究共同接种周细胞(收缩性,αSMA + 间充质干细胞样细胞,位于微血管内的细胞)对生长和转移性扩散的影响。 卵巢癌使用侵袭性卵巢癌细胞系-OVCAR-5-作为例子。

【背景】生物发光成像(BLI)的原理是基于相对简单的生化过程的发光特性,即,荧光素酶介导的分子底物荧光素氧化产生光。在癌症研究中,BLI是一种流行的工具(Contag et ...

Comments