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Company: Biosharp
Catalog#: BS-15-M
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A Novel Method to Construct Binary CRISPR Vectors for Plant Transformation by Single Round of PCR Amplification
Author:
Date:
2021-04-05
[Abstract]  

CRISPR/Cas9 is an established and flexible tool for genome editing. However, most methods used to generate expression clones for the CRISPR/Cas9 are time-consuming. Hence, we have developed a one-step protocol to introduce sgRNA expression cassette(s) directly into binary vectors (Liu et al., 2020). In this approach, we have optimized the multiplex PCR to produce an overlapping PCR product in a single reaction to generate the sgRNA expression cassette. We also amplified two sgRNA expression cassettes through a single round of PCR. Then, the sgRNA expression cassette(s) is cloned into the binary vectors in a Gateway LR or Golden gate reaction. The system reported here provides a much more efficient and simpler procedure to construct expression clones for CRISPR/Cas9-mediated genome

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[摘要]  [摘要] CRISPR / Cas9是一种成熟且灵活的基因组编辑工具。但是,大多数用于生成CRISPR / Cas9表达克隆的方法都很耗时。因此,我们开发了一种将sgRNA表达盒直接引入二元载体的一步协议(Liu等人,2020年)。在这种方法中,我们优化了多重PCR,以在单个反应中产生重叠的PCR产物,从而生成sgRNA表达盒。我们还通过单轮PCR扩增了两个sgRNA表达盒。然后,在Gateway LR或Golden gate反应中将sgRNA表达盒克隆到二元载体中。本文报道的系统为构建用于CRISPR / Cas9介导的基因组编辑的表达克隆提供了更有效,更简单的程序。在此协议中,我们描述了使用此系统的详细分步说明。


[背景]乙acteria保卫针对病毒通过蛋白系统,由群集规则间隔开的短回文重复序列(CRISPR)中,CRISPR相关(CAS)蛋白质,CRISPR的RNA(crRNAs)和反式编码crRNA(tracrRNA)。现在,研究人员已经将其系统开发为用于靶向基因组编辑的关键工具。CRISPR –二元载体表达两个元素–具有靶序列的sgRNA(target-sgRNA)和Cas9蛋白–切割靶基因组区域。冯等人。(2013年)已经构建了网关载体,通过农杆菌介导的转化在植物中共表达Cas9和sgRNA ...

A mant-GDP Dissociation Assay to Compare the Guanine Nucleotide Binding Preference of Small GTPases
Author:
Date:
2021-01-20
[Abstract]  

Small GTPases are cellular switches that are switched on when bound to GTP and switched off when bound to GDP. Different small GTPase proteins or those with mutations may bind to GTP or GDP with different relative affinities. However, small GTPases generally have very high affinities for guanine nucleotides, rendering it difficult to compare the relative binding affinities for GTP and GDP. Here we developed a method for comparing the relative binding strength of a protein to GTP and GDP using a mant-GDP dissociation assay, whereby the abilities of GTP and GDP to induce the dissociation of bound mant-GDP are compared. This equilibrium type assay is simple, economic, and much faster than obtaining each protein’s affinity for GDP and GTP. The GDP/GTP preference value obtained is useful

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[摘要]  [摘要]小型GTPases是蜂窝交换机,绑定到GTP时打开,绑定到GDP时关闭。不同的小GTPase蛋白或具有突变的蛋白可能以不同的亲和力与GTP或GDP结合。然而,小的GTP酶通常具有非常高的鸟嘌呤核苷酸亲和力,使得难以比较GTP和GDP的相对结合亲和力。在这里,我们开发了一种方法,使用以下方法比较蛋白质与GTP和GDP的相对结合强度 mant-GDP解离分析,比较了GTP和GDP诱导绑定的mant-GDP解离的能力。这种平衡类型测定简单,经济并且比获得每种蛋白质对GDP和GTP的亲和力要快得多。Ť他GDP / GTP偏好值获得是用于比较的相对GTP有用/ GDP结合偏好小号不同GTP酶或不同的突变体,尽管这不是真正的GDP / GTP亲和力比(而是比的估计)。

[背景]小GTP酶(也称为小G蛋白)是一组功能上重要的大分子,由于其固有的水解酶活性,它们可以与GTP结合并水解为GDP 。在人类,米矿比一百种不同的小GTP酶分为五个家庭,即RAS,卢,冉,拉布和Arf的,根据其序列,结构,和功能(Wennerberg等,2005) 。

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CRISPR/Cas9-mediated ssDNA Recombineering in Corynebacterium glutamicum
Author:
Date:
2018-10-05
[Abstract]  Corynebacterium glutamicum is a versatile workhorse for industrial bioproduction of many kinds of chemicals and fuels, notably amino acids. Development of advanced genetic engineering tools is urgently demanded for systems metabolic engineering of C. glutamicum. Recently unveiled clustered regularly interspaced short palindromic repeats (CRISPR) and their CRISPR-associated proteins (Cas) are now revolutionizing genome editing. The CRISPR/Cas9 system from Streptococcus pyogenes that utilizes NGG as protospacer adjacent motif (PAM) and has good targeting specificity can be developed into a powerful tool for efficient and precise genome editing of C. glutamicum. In this protocol, we described the general procedure for CRISPR/Cas9-mediated ssDNA ... [摘要]  谷氨酸棒杆菌是多种化学品和燃料,特别是氨基酸的工业生物生产的多功能工具。 迫切需要开发先进的基因工程工具用于 C的系统代谢工程。谷氨酸。 最近推出的聚集的有规律的间隔短回文重复序列(CRISPR)和它们的CRISPR相关蛋白(Cas)现在正在彻底改变基因组编辑。 来自 Streptococcus pyogenes 的CRISPR / Cas9系统利用NGG作为原型间隔区相邻基序(PAM)并具有良好的靶向特异性,可以开发成为 C的高效和精确基因组编辑的有力工具。谷氨酸。 在该方案中,我们描述了 C中CRISPR / Cas9介导的ssDNA重组工程的一般程序。谷氨酸。 可以在 C中引入小的修改。 谷氨酸染色体,编辑效率高达90%。
【背景】革兰氏阳性土壤细菌 Corynebacterium glutamicum 是用于氨基酸,生物燃料和聚合物构建模块的工业生物生产的多功能工具(Becker et al。,2016)。在 C工程的早期阶段。谷氨酸,随机诱变结合对氨基酸类似物的表型抗性的阳性选择是最常用的策略(Vertes et al。,2005)。 C中的遗传操作。谷氨酸(glutamicum)于1984年启动,并成为菌株改良的关键促成策略(Ozaki et al。,1984)。常规使用的基因破坏和插入 ...

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