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PureLink® Genomic DNA Mini Kit

PureLink ®基因组DNA迷你试剂盒

Company: Thermo Fisher Scientific
Catalog#: K182002
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Efficient AAV-mediated Gene Targeting Using 2A-based Promoter-trap System
Author:
Date:
2016-12-20
[Abstract]  Adeno-associated virus (AAV)-based targeting vectors have 1-4-log higher gene targeting efficiencies compared with plasmid-based targeting vectors. The efficiency of AAV-mediated gene targeting is further increased by introducing a promoter-trap system into targeting vectors. In addition, we found that the use of ribosome-skipping 2A peptide rather than commonly used internal ribosome entry site (IRES) in the promoter-trap system results in significantly higher AAV-mediated gene targeting efficiencies (Karnan et al., 2016). In this protocol, we describe the procedures for AAV-mediated gene targeting exploiting 2A for promoter trapping, including the construction of a targeting vector based on the platform plasmid pAAV-2Aneo or pAAV-2Aneo v2, production of AAV particles, infection ... [摘要]  与基于质粒的靶向载体相比,基于腺相关病毒(AAV)的靶向载体具有1-4对较高的基因靶向效率。 通过将启动子捕获系统引入靶向载体中,AAV介导的基因靶向的效率进一步增加。 此外,我们发现使用核糖体跳跃2A肽而不是通常使用的内部核糖体进入位点(IRES)在启动子捕获系统中导致显着更高的AAV介导的基因靶向效率(Karnan等,2016)。 在该方案中,我们描述了AAV介导的基因靶向开发2A用于启动子捕获的程序,包括基于平台质粒pAAV-2Aneo或pAAV-2Aneo v2的靶向载体的构建,AAV颗粒的产生,细胞感染 基于AAV的靶向载体,以及基因靶向细胞克隆的分离和验证。
【背景】以前在其他方案中描述了AAV介导的基因靶向的程序(对应于本方案的BG部分)(Kohli等人,2004; Rago等人,2007; Khan等人,2011; Howes and Schofield ,2015)。 然而,该方案提供了如何使用基于2A的启动子捕获系统首次进行AAV介导的基因靶向的详细描述。

Human, Bacterial and Fungal Amplicon Collection and Processing for Sequencing
Author:
Date:
2015-05-20
[Abstract]  Sequencing taxonomic marker genes is a powerful tool to interrogate the composition of microbial communities. For example, bacterial and fungal community composition can be evaluated in parallel using the 16S ribosomal RNA gene for bacteria or the internal transcribed spacer region in fungi. These are conserved regions that are universal to a taxonomic clade, yet have undergone some degree of evolution such that different lineages can be differentiated. Conserved regions are used for design of universal priming sites that allow amplification of the marker gene out of a mixed microbial community. Here, we describe our standard operating procedure to collect and sequence 16S rRNA and ITS1 amplicons from human skin. We use the 16S rRNA V1-V3 region for skin samples, as it has greater power ... [摘要]  测序分类标记基因是一个强有力的工具,以询问微生物群落的组成。 例如,可以使用细菌的16S核糖体RNA基因或真菌中的内部转录间隔区平行评估细菌和真菌群落组成。 这些是对分类学分支是通用的保守区,但已经经历了某种程度的进化,使得不同谱系可以分化。 保守区用于设计允许从混合微生物群落扩增标记基因的通用引发位点。 在这里,我们描述我们的标准操作程序收集和序列16S rRNA和ITS1扩增子从人类皮肤。 我们使用16S rRNA V1-V3区域的皮肤样本,因为它有更大的权力分类皮肤中的常见葡萄球菌。 该方案适用于扩增子的454焦磷酸测序。

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