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Bacto yeast extract

Company: BD
Catalog#: 212730
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Dual sgRNA-based Targeted Deletion of Large Genomic Regions and Isolation of Heritable Cas9-free Mutants in Arabidopsis
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Date:
2020-10-20
[Abstract]  CRISPR/Cas9 system directed by a gene-specific single guide RNA (sgRNA) is an effective tool for genome editing such as deletions of few bases in coding genes. However, targeted deletion of larger regions generate loss-of-function alleles that offer a straightforward starting point for functional dissections of genomic loci. We present an easy-to-use strategy including a fast cloning dual-sgRNA vector linked to efficient isolation of heritable Cas9-free genomic deletions to rapidly and cost-effectively generate a targeted heritable genome deletion. This step-by-step protocol includes gRNA design, cloning strategy and mutation detection for Arabidopsis and may be adapted for other plant species. [摘要]  [摘要] CRISPR/Cas9由基因特异性单导RNA(sgRNA)引导的系统是一种有效的基因组编辑工具,如编码基因中少部分碱基的删除。然而,大区域的靶向缺失产生功能缺失等位基因,这为基因组基因座的功能解剖提供了一个直接的起点。我们提出了一个简单易用的策略,包括一个快速克隆双sgRNA载体,有效分离可遗传的Cas9游离基因组缺失,以快速且经济有效地产生靶向遗传基因组缺失。该方法包括拟南芥的gRNA设计、克隆策略和突变检测,可适用于其他植物。

[背景] ...

Determination of the in vitro Sporulation Frequency of Clostridium difficile
Author:
Date:
2017-02-05
[Abstract]  The anaerobic, gastrointestinal pathogen, Clostridium difficile, persists within the environment and spreads from host-to-host via its infectious form, the spore. To effectively study spore formation, the physical differentiation of vegetative cells from spores is required to determine the proportion of spores within a population of C. difficile. This protocol describes a method to accurately enumerate both viable vegetative cells and spores separately and subsequently calculate a sporulation frequency of a mixed C. difficile population from various in vitro growth conditions (Edwards et al., 2016b). [摘要]  厌氧,胃肠道病原体,艰难梭菌在环境中持续存在,并通过其感染形式,孢子从宿主到宿主传播。为了有效地研究孢子形成,需要从孢子中进行营养细胞的物理分化以确定在C群体内孢子的比例。艰难的。该方案描述了分别精确地枚举活的营养细胞和孢子的方法,并随后计算混合的孢子形成频率。来自各种体外生长条件(Edwards等人,2016b)的难治性群体。

背景 孢子形成是一个复杂的发育过程,导致代谢休眠孢子的形成。 C的物理性质。艰难的孢子形式提供了许多环境胁迫和消毒剂的内在抵抗,允许其在宿主之外的长期生存(参见:Paredes-Sabja等人,2014年)。区分营养细胞和C孢子。已经开发了利用孢子的物理和抗性属性的各种技术,包括短时间暴露于湿热或乙醇(Burns等人,2010; Lawley& et al。,2010; Edwards等人,2014)。然而,根据C的应变,这些技术可能不经意地对孢子造成长期损害。难以测试,导致恢复率不准确。在这里,我们描述了使用比以前描述的较低浓度的乙醇(40%以下的乙醇)的优化方法以消除异质C中的所有营养细胞。艰难梭菌群体,而不降低孢子的生存力。该技术为量化C提供了高度可重现性和较不可变的结果。难产孢子孢子形成。

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